BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031E12SP1|AL429422
(959 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig113 873 0.0
>3x_Contig113
Length = 772
Score = 873 bits (439), Expect = 0.0
Identities = 453/461 (98%)
Strand = Plus / Plus
Query: 499 atccccttttgcatcacctttagctgcgccacctttatacgactgcccctttttacctct 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atccccttttgcatcacctttagctgcgccacctttatacgactgcccctttttacctct 60
Query: 559 gccattgatagtgtggacatcgtctccagtctggttgcttattgaagccatcgctttctg 618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gccattgatagtgtggacatcgtctccagtctggttgcttattgaagccatcgctttctg 120
Query: 619 gaaattttcctctctaaaagtacccttttcatcaaccacgagatggataccgtcaccatg 678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaaattttcctctctaaaagtacccttttcatcaaccacgagatggataccgtcaccatg 180
Query: 679 agctgggaataaataatgttgtwatggggttggacggaagtcgttgtaaacaatgtgaca 738
|||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||
Sbjct: 181 agctgggaataaataatgttgtaatggggttggacggaagtccgtgtaaacaatgtgaca 240
Query: 739 tggttgggagtkaattctacagatccattccgcaaattccatagcatttggaatagtagc 798
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tggttgggagtgaattctacagatccattccgcaaattccatagcatttggaatagtagc 300
Query: 799 tgaaaggaaaacataatgaaccttatcaggtagtwagataatagtttcttcccaaacaac 858
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 301 tgaaaggaaaacataatgaaccttatcaggtagtaagataatagtttcttcccaaacaac 360
Query: 859 acctctttctttatctctyatataatgcacttcatcgaaaataacccatgcaacttctct 918
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 acctctttctttatctctcatataatgcacttcatcgaaaataacccatgcaacttctct 420
Query: 919 catgacttcactacctctgttaagcatacttcttwaaattt 959
|||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 421 catgacttcactacctctgtaaagcatacttcttaaaattt 461
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7042
Number of Sequences: 1807
Number of extensions: 7042
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 959
length of database: 10,358,551
effective HSP length: 16
effective length of query: 943
effective length of database: 10,329,639
effective search space: 9740849577
effective search space used: 9740849577
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)